Sashimi-plot is a utility for automatically producing publication-quality plots for RNA-Seq analyses of isoform expression. It is part of the MISO framework.

In particular, sashimi-plot can: (1) plot raw RNA-Seq densities along exons and junctions for multiple samples, while simultaneously visualizing the gene model/isoforms to which reads map, and (2) plot MISO output alongside the raw data or separately.


相关论文:Katz Y, Wang ET, Airoldi EM, Burge CB. (2010) Analysis and design of RNA sequencing experiments for identifying isoform regulation. Nature Methods 7, 1009-1015.

  • 本文由 整理发表
  • 网站部分文章源自互联网,若未正确标注来源,请联系管理员更新。文章转载,请务必保留本文链接